STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED52292.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (432 aa)    
Predicted Functional Partners:
SED52394.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.893
SED52334.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.879
SEE20728.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.790
SEE71130.1
Extracellular solute-binding protein.
  
     0.736
SEE61280.1
Multiple sugar transport system substrate-binding protein.
  
     0.710
SED68705.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Manually curated.
  
  0.702
SED52433.1
Beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
 
     0.699
SED73715.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.691
SEE71090.1
Multiple sugar transport system permease protein.
  
  0.683
SEE82846.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.662
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.