STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED52334.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (321 aa)    
Predicted Functional Partners:
SED52394.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.957
SED52717.1
Putative aldouronate transport system permease protein.
   
  0.929
SED52672.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
     
 
0.902
SED52292.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  0.879
SED91687.1
Multiple sugar transport system permease protein.
 
  0.796
SEE84656.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.795
SED73715.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.793
SEE20728.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.793
SEE71090.1
Multiple sugar transport system permease protein.
  
  0.786
SEE86778.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.782
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.