STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED52758.1Putative aldouronate transport system substrate-binding protein. (552 aa)    
Predicted Functional Partners:
SED52717.1
Putative aldouronate transport system permease protein.
 
  0.930
SED52672.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.918
SEE71396.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.848
SEE80203.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.848
SEE67646.1
Multiple sugar transport system permease protein.
  
  0.847
SEE89032.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.845
SEE25541.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.841
SEE67622.1
Putative aldouronate transport system permease protein.
 
  0.822
SEE71421.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.822
SEE80175.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family; Manually curated.
 
  0.822
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.