STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED54543.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (719 aa)    
Predicted Functional Partners:
SEE27902.1
Peptide/nickel transport system permease protein.
 
 
  0.846
SEE97080.1
Peptide/nickel transport system permease protein.
 
 
0.793
SEE71743.1
Peptide/nickel transport system permease protein.
 
 
  0.775
SED54600.1
Peptide/nickel transport system permease protein.
 
  0.772
SEE81796.1
Peptide/nickel transport system permease protein.
 
 
  0.764
SEF00353.1
Peptide/nickel transport system permease protein.
 
 
  0.746
SEE30294.1
Peptide/nickel transport system permease protein.
 
 
  0.730
SEF00712.1
Peptide/nickel transport system permease protein.
 
 
  0.730
SEE93875.1
Energy-coupling factor transport system permease protein.
  
  0.725
SEF00823.1
Energy-coupling factor transport system permease protein.
   
  0.715
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.