STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED54735.1DNA-binding transcriptional regulator, LacI/PurR family. (368 aa)    
Predicted Functional Partners:
SEE99625.1
Transcriptional regulator, LacI family.
  
     0.756
SEE15981.1
Glutamate synthase (NADH) large subunit.
    
 
 0.728
SED93319.1
Transcriptional regulator, LacI family.
  
     0.720
SEE86955.1
Regulatory protein, lacI family.
  
     0.701
SEE70778.1
Transcriptional regulator, LacI family.
  
     0.688
SEE77283.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.688
SEE61585.1
Transcriptional regulator, LacI family.
  
     0.685
SEE93504.1
Transcriptional regulator, LacI family.
  
     0.683
SED55442.1
Transcriptional regulator, LacI family.
  
     0.681
SED49387.1
LacI family transcriptional regulator; Manually curated.
  
     0.680
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.