STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED65763.1Hypothetical protein. (115 aa)    
Predicted Functional Partners:
SED65724.1
MFS transporter, DHA2 family, multidrug resistance protein.
       0.581
SED65898.1
ATP-dependent DNA helicase PcrA.
       0.523
SEE90459.1
LytR cell envelope-related transcriptional attenuator.
  
     0.512
SED65806.1
Solute carrier family 34 (sodium-dependent phosphate cotransporter).
       0.463
SED65855.1
Hypothetical protein.
       0.463
SEE62698.1
Lysophospholipase L1.
  
     0.453
SED96767.1
Calcineurin-like phosphoesterase superfamily domain-containing protein.
  
     0.452
SED83158.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.449
SEE02987.1
Protein of unknown function.
  
     0.426
SEE04485.1
Hypothetical protein.
  
     0.426
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.