STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdhMalate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. (328 aa)    
Predicted Functional Partners:
fumC
Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 0.982
SEE89441.1
Citrate synthase; Manually curated.
  
 0.981
SED99847.1
methylmalonyl-CoA mutase.
    
 0.971
SEE15981.1
Glutamate synthase (NADH) large subunit.
  
 
 0.971
SEE89425.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.959
SEE93912.1
Citrate synthase; Manually curated.
  
 0.959
SEE62474.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
  
 0.957
SEE90739.1
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
 0.957
SEE97324.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.957
SEE99382.1
Succinate dehydrogenase subunit A.
  
 0.948
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.