STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED68207.1Amino acid ABC transporter substrate-binding protein, PAAT family. (283 aa)    
Predicted Functional Partners:
SED86751.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.978
SED68294.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.970
SED68252.1
Amino acid ABC transporter membrane protein, PAAT family.
 
  0.965
SED86714.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.951
SEE75664.1
Hypothetical protein.
    
 0.928
SED76497.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.870
SED86837.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.855
SED74200.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 0.826
SED76455.1
Amino acid ABC transporter membrane protein, PAAT family.
 
  0.817
SED74248.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
  0.800
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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