STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED74937.1Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains. (240 aa)    
Predicted Functional Partners:
SEE31954.1
MOSC domain-containing protein.
  
     0.600
SED81122.1
uroporphyrinogen-III C-methyltransferase.
  
 
 0.574
SEE08896.1
DinB superfamily protein.
  
    0.526
SEE11445.1
Hypothetical protein.
  
     0.482
SEE04485.1
Hypothetical protein.
  
     0.469
SED74969.1
ABC-2 type transport system ATP-binding protein.
       0.440
SED75010.1
ABC-2 type transport system permease protein.
       0.440
SED70368.1
Protein of unknown function.
  
     0.427
SEE15981.1
Glutamate synthase (NADH) large subunit.
  
  
 0.418
SED74898.1
Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family.
       0.409
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.