STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED76059.1DNA-binding transcriptional regulator, LacI/PurR family. (342 aa)    
Predicted Functional Partners:
SED76102.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.786
SED76223.1
FAD dependent oxidoreductase.
 
 
   0.771
SEE80086.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.760
SED76137.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family; Manually curated.
 
     0.732
SEE15981.1
Glutamate synthase (NADH) large subunit.
    
 
 0.728
SED76179.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.709
SEE94200.1
NPCBM-associated, NEW3 domain of alpha-galactosidase.
  
  
  0.668
SEE20292.1
FAD dependent oxidoreductase.
  
 
   0.556
SEE97660.1
FAD dependent oxidoreductase.
  
 
   0.553
SEE88706.1
FAD dependent oxidoreductase.
  
 
   0.552
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.