STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED78505.1Predicted glycosyl hydrolase, GH43/DUF377 family. (347 aa)    
Predicted Functional Partners:
SED78386.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.932
SED78539.1
Hypothetical protein.
 
     0.924
SED78427.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.918
SED78467.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.918
SED78355.1
DNA-binding transcriptional regulator, LacI/PurR family.
 
     0.865
SEE80247.1
Hypothetical protein.
  
     0.579
SEE78684.1
Hypothetical protein.
  
     0.550
SED78312.1
Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides.
       0.544
SEE80940.1
Glycoside/pentoside/hexuronide:cation symporter, GPH family.
 
     0.426
SEE20251.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
  
     0.421
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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