STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED81671.1Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands. (164 aa)    
Predicted Functional Partners:
SED81707.1
6-phospho-beta-glucosidase.
       0.608
SED81629.1
Sugar or nucleoside kinase, ribokinase family.
       0.562
SED81748.1
F420-dependent oxidoreductase, G6PDH family.
       0.546
SED81785.1
Coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase.
       0.546
SEE68653.1
23S rRNA (adenine-N6)-dimethyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.475
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.475
SEE65695.1
alpha-N-acetylglucosaminidase.
  
     0.473
SEE92894.1
Protein of unknown function.
  
     0.409
SEE16856.1
tRNA (adenine57-N1/adenine58-N1)-methyltransferase.
  
 
   0.404
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.