STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED96360.1Transcriptional regulator, LacI family. (333 aa)    
Predicted Functional Partners:
SED60101.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.772
SEE15981.1
Glutamate synthase (NADH) large subunit.
    
 
 0.728
SED96399.1
Transcriptional regulator, LacI family.
 
    
0.659
SED54735.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.585
SEE32939.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.559
SEF01256.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.551
SEE83430.1
Regulatory protein, gntR family.
  
     0.471
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the GTP cyclohydrolase II family.
    
   0.468
SEE83125.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.452
SED96259.1
Raffinose/stachyose/melibiose transport system permease protein.
       0.450
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.