Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SED98679.1Hypothetical protein. (237 aa)    
Predicted Functional Partners:
SED98603.1
FHA domain-containing protein.
 
     0.933
SED98643.1
Serine/threonine protein kinase.
 
 
   0.916
SED98808.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
     0.893
SED98855.1
Transglutaminase-like superfamily protein.
 
     0.888
SED98732.1
Fibronectin type III domain-containing protein.
 
     0.887
SEE99531.1
2-oxoglutarate dehydrogenase, E1 component.
    
 
 0.827
SEE99545.1
2-oxoglutarate dehydrogenase N-terminus.
    
 
 0.827
SEE02812.1
Serine/threonine protein kinase.
   
 
 0.788
SEE79782.1
Serine/threonine protein kinase.
   
 
 0.788
SEE27218.1
Hypothetical protein.
 
     0.768
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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