STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE03473.1Hypothetical protein. (197 aa)    
Predicted Functional Partners:
SEE03436.1
Acyl-CoA synthetase (NDP forming).
     0.900
SEE03521.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
 
     0.862
SEE03403.1
DNA topoisomerase IV subunit A.
 
     0.759
SEE17164.1
Hypothetical protein; Manually curated.
  
     0.745
SED90803.1
ABC-2 type transport system permease protein.
  
     0.704
SED51375.1
Protein of unknown function.
  
     0.687
SED88610.1
SseB protein N-terminal domain-containing protein.
  
     0.648
SEE90544.1
Protein of unknown function.
  
     0.637
SED85292.1
Hypothetical protein.
  
     0.631
SEE27599.1
DNA-binding transcriptional regulator, IclR family.
  
     0.623
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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