STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE08683.1AraC-type DNA-binding protein. (143 aa)    
Predicted Functional Partners:
SEE08722.1
Uncharacterized conserved protein PhnB, glyoxalase superfamily.
 
    0.952
SEE15981.1
Glutamate synthase (NADH) large subunit.
    
  0.792
SEE08643.1
Arylsulfatase A.
       0.773
SEE08304.1
Release factor glutamine methyltransferase.
 
      0.770
SEE20335.1
Helix-turn-helix domain-containing protein.
  
   0.741
SEE08780.1
Pyridoxamine 5'-phosphate oxidase.
       0.739
SEE61022.1
AraC-type DNA-binding protein.
  
     0.696
SEE73864.1
AraC-type DNA-binding protein.
  
     0.689
SEE77435.1
AraC-type DNA-binding protein.
  
     0.673
SEE89338.1
Transcriptional regulator, AraC family.
  
     0.668
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.