Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SED75276.1 | SEE01413.1 | SAMN04488554_0605 | SAMN04488554_1308 | Protein of unknown function. | Protein of unknown function. | 0.683 |
| SED75276.1 | SEE03600.1 | SAMN04488554_0605 | SAMN04488554_1361 | Protein of unknown function. | Protein of unknown function. | 0.587 |
| SED75276.1 | SEE10319.1 | SAMN04488554_0605 | SAMN04488554_1531 | Protein of unknown function. | MerR HTH family regulatory protein; Manually curated. | 0.759 |
| SED75276.1 | rbpA | SAMN04488554_0605 | SAMN04488554_1479 | Protein of unknown function. | RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.607 |
| SED75276.1 | rpoZ | SAMN04488554_0605 | SAMN04488554_1452 | Protein of unknown function. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.457 |
| SED75276.1 | whiB-3 | SAMN04488554_0605 | SAMN04488554_0531 | Protein of unknown function. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.774 |
| SED75276.1 | whiB-5 | SAMN04488554_0605 | SAMN04488554_4112 | Protein of unknown function. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.758 |
| SEE01413.1 | SED75276.1 | SAMN04488554_1308 | SAMN04488554_0605 | Protein of unknown function. | Protein of unknown function. | 0.683 |
| SEE01413.1 | SEE03600.1 | SAMN04488554_1308 | SAMN04488554_1361 | Protein of unknown function. | Protein of unknown function. | 0.747 |
| SEE01413.1 | SEE10319.1 | SAMN04488554_1308 | SAMN04488554_1531 | Protein of unknown function. | MerR HTH family regulatory protein; Manually curated. | 0.764 |
| SEE01413.1 | rbpA | SAMN04488554_1308 | SAMN04488554_1479 | Protein of unknown function. | RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.748 |
| SEE01413.1 | rpoZ | SAMN04488554_1308 | SAMN04488554_1452 | Protein of unknown function. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.481 |
| SEE01413.1 | whiA | SAMN04488554_1308 | SAMN04488554_1630 | Protein of unknown function. | Hypothetical protein; Involved in cell division and chromosome segregation. | 0.456 |
| SEE01413.1 | whiB-3 | SAMN04488554_1308 | SAMN04488554_0531 | Protein of unknown function. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.514 |
| SEE03600.1 | SED75276.1 | SAMN04488554_1361 | SAMN04488554_0605 | Protein of unknown function. | Protein of unknown function. | 0.587 |
| SEE03600.1 | SEE01413.1 | SAMN04488554_1361 | SAMN04488554_1308 | Protein of unknown function. | Protein of unknown function. | 0.747 |
| SEE03600.1 | SEE10319.1 | SAMN04488554_1361 | SAMN04488554_1531 | Protein of unknown function. | MerR HTH family regulatory protein; Manually curated. | 0.772 |
| SEE03600.1 | rbpA | SAMN04488554_1361 | SAMN04488554_1479 | Protein of unknown function. | RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.775 |
| SEE03600.1 | rpoZ | SAMN04488554_1361 | SAMN04488554_1452 | Protein of unknown function. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.737 |
| SEE03600.1 | whiA | SAMN04488554_1361 | SAMN04488554_1630 | Protein of unknown function. | Hypothetical protein; Involved in cell division and chromosome segregation. | 0.770 |
page 1 of 4