STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE13040.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (336 aa)    
Predicted Functional Partners:
SEE13082.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.960
SEE13203.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.833
SED53159.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
  0.761
SED53065.1
Multiple sugar transport system permease protein.
  
  0.744
SED49570.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Manually curated.
  
  0.726
SEE60735.1
Multiple sugar transport system permease protein.
 
  0.722
SEE87716.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.676
SED99546.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
   
  0.636
SEE81279.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
  0.607
SEE95203.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Manually curated.
  
  0.597
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.