STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE14694.1Putative copper resistance protein D. (694 aa)    
Predicted Functional Partners:
SEE14734.1
Cu+-exporting ATPase.
       0.779
SEE02394.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
 
  
 0.699
SEE14779.1
Hypothetical protein.
       0.662
SEE14639.1
Peptidase family M48.
 
     0.650
SEE02179.1
Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.641
SEE02351.1
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor.
 
    0.611
SEE86898.1
Carbohydrate binding domain-containing protein.
  
     0.596
SEE86741.1
Hypothetical protein.
  
     0.591
SEE14601.1
Predicted transcriptional regulator.
 
     0.589
SEE02303.1
Menaquinol-cytochrome c reductase cytochrome b subunit precursor.
 
    0.575
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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