STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE14937.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (475 aa)    
Predicted Functional Partners:
SEE14888.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.989
SEE14847.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.964
SEE14974.1
Uncharacterized protein, contains SIS (Sugar ISomerase) phosphosugar binding domain.
 
     0.897
SEE95355.1
N-acetylglucosamine transport system permease protein.
  
  0.834
SEE95343.1
N-acetylglucosamine ABC transporter membrane protein /chitobiose ABC transporter membrane protein.
  
  0.776
SEE15001.1
DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains.
 
     0.743
SED89279.1
Hypothetical protein.
  
     0.725
SEE15033.1
BadF-type ATPase.
 
    0.714
SED76295.1
endo-alpha-N-acetylgalactosaminidase.
  
     0.651
SED83489.1
ABC-type sugar transport system, ATPase component; Belongs to the ABC transporter superfamily.
   
  0.574
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.