STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE17490.1Osmoprotectant transport system substrate-binding protein. (316 aa)    
Predicted Functional Partners:
SEE17542.1
Osmoprotectant transport system permease protein.
 
 0.999
SEE17607.1
Osmoprotectant transport system permease protein.
 
 0.999
SED82900.1
Osmoprotectant transport system permease protein.
 
 0.998
SED82937.1
Osmoprotectant transport system permease protein.
 
 0.998
SEE17575.1
Osmoprotectant transport system ATP-binding protein.
 0.994
SED82971.1
Osmoprotectant transport system ATP-binding protein.
 0.982
SED82862.1
Osmoprotectant transport system substrate-binding protein.
  
  
 
0.944
SEE74942.1
Glycine betaine/proline transport system permease protein.
 
  
 0.841
SEE17639.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.681
SEE17454.1
Hypothetical protein.
       0.526
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.