STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE17639.1L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (375 aa)    
Predicted Functional Partners:
SEE17542.1
Osmoprotectant transport system permease protein.
       0.773
SEE17575.1
Osmoprotectant transport system ATP-binding protein.
       0.773
SEE17607.1
Osmoprotectant transport system permease protein.
       0.773
SEE71661.1
L-alanine-DL-glutamate epimerase.
  
     0.721
SEE17490.1
Osmoprotectant transport system substrate-binding protein.
       0.681
SEE95253.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
  
 
0.668
SEE99277.1
Glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
  
 
0.660
SEE84674.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
  
 
0.658
SEE17682.1
DNA-binding transcriptional regulator, IclR family.
       0.526
SEE17454.1
Hypothetical protein.
       0.463
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.