STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE22061.1Pimeloyl-ACP methyl ester carboxylesterase. (390 aa)    
Predicted Functional Partners:
SEE22093.1
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
 
     0.816
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 0.745
SED65173.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.687
SED99847.1
methylmalonyl-CoA mutase.
     
 0.680
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
   
  0.577
SED77301.1
Regulatory protein, tetR family.
  
     0.544
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
  0.531
SEE04122.1
IMP dehydrogenase.
   
  0.531
SED75088.1
Acyl-CoA dehydrogenase.
   
  0.508
SED82380.1
Acyl-CoA dehydrogenase.
   
  0.508
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.