STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE24074.1ABC-2 type transport system ATP-binding protein. (254 aa)    
Predicted Functional Partners:
SEE24116.1
ABC-2 type transport system permease protein.
    0.923
SEE96713.1
ABC-2 type transport system permease protein.
 
    0.741
SEE92699.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  
 
0.719
SED82971.1
Osmoprotectant transport system ATP-binding protein.
 
    
0.704
SED76497.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
   
 
0.680
SED75010.1
ABC-2 type transport system permease protein.
   
  0.649
SEE22523.1
ABC-2 type transport system permease protein.
   
  0.649
SEE90192.1
ABC-2 type transport system permease protein.
   
  0.649
SEE74966.1
Glycine betaine/proline transport system ATP-binding protein.
 
     
0.592
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.569
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.