STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE26270.1Altronate hydrolase; Manually curated. (514 aa)    
Predicted Functional Partners:
SEE26032.1
2-dehydro-3-deoxygluconokinase.
 
  
 0.910
SED97368.1
Fructuronate reductase; Belongs to the mannitol dehydrogenase family.
 
 0.907
uxaC
Glucuronate isomerase.
  
 0.880
SED75657.1
Mannitol 2-dehydrogenase.
 
 
 0.840
SEE94953.1
(2R)-3-sulfolactate dehydrogenase (NADP+); Belongs to the LDH2/MDH2 oxidoreductase family.
 
  
  0.757
SED52948.1
Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family.
 
  
  0.756
SEE82122.1
2-dehydro-3-deoxygalactonokinase.
  
  
  0.717
SEE61559.1
D-mannonate dehydratase.
    
  0.697
SEE74469.1
Galactonate dehydratase.
    
  0.697
SEE95010.1
Mannonate dehydratase.
    
  0.697
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.