STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE29252.1Pyridine nucleotide-disulphide oxidoreductase. (394 aa)    
Predicted Functional Partners:
SED58475.1
Ferredoxin-NADP reductase.
  
 0.981
SEE15981.1
Glutamate synthase (NADH) large subunit.
    
 0.942
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.930
SED81085.1
Assimilatory nitrite reductase (NAD(P)H) small subunit.
 
 0.904
SEE90684.1
Hypothetical protein.
    
   0.879
SEE95414.1
D-amino-acid dehydrogenase.
 
 0.862
SEE29561.1
Glycine/D-amino acid oxidase.
  
 0.843
SEE29872.1
Sarcosine oxidase.
  
 0.843
SEE30072.1
Glycine/D-amino acid oxidase.
  
 0.843
SEE66713.1
Sarcosine oxidase.
  
 0.843
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.