STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE66219.1LysM domain-containing protein. (221 aa)    
Predicted Functional Partners:
SEE66150.1
Putative baseplate assembly protein.
 
 
 0.996
SEE66170.1
Hypothetical protein.
 
   0.996
SEE66354.1
Hypothetical protein.
 
 
 0.986
SEE66264.1
Conserved hypothetical phage tail region protein.
 
   0.966
SEE66329.1
Conserved hypothetical phage tail region protein.
 
   0.961
SEE66195.1
Uncharacterized conserved protein, implicated in type VI secretion and phage assembly.
 
    0.956
SEE66310.1
Hypothetical protein.
 
    0.825
SEE66125.1
Phage tail protein domain-containing protein.
  
    0.818
SEE65977.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
 
     0.815
SEE66101.1
Hypothetical protein.
       0.795
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.