Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SED51843.1 | SEE68121.1 | SAMN04488554_0062 | SAMN04488554_2443 | Superfamily II DNA and RNA helicase. | ATP-dependent DNA helicase RecQ. | 0.829 |
SED65898.1 | SED70483.1 | SAMN04488554_0367 | SAMN04488554_0480 | ATP-dependent DNA helicase PcrA. | DNA helicase-2 / ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily. | 0.919 |
SED65898.1 | SED93014.1 | SAMN04488554_0367 | SAMN04488554_1089 | ATP-dependent DNA helicase PcrA. | 5'-3' exonuclease. | 0.545 |
SED65898.1 | SED94904.1 | SAMN04488554_0367 | SAMN04488554_1137 | ATP-dependent DNA helicase PcrA. | Lamin Tail Domain. | 0.457 |
SED65898.1 | SEE68121.1 | SAMN04488554_0367 | SAMN04488554_2443 | ATP-dependent DNA helicase PcrA. | ATP-dependent DNA helicase RecQ. | 0.871 |
SED65898.1 | SEE97353.1 | SAMN04488554_0367 | SAMN04488554_4013 | ATP-dependent DNA helicase PcrA. | Concanavalin A-like lectin/glucanases superfamily protein. | 0.457 |
SED65898.1 | polA | SAMN04488554_0367 | SAMN04488554_1663 | ATP-dependent DNA helicase PcrA. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.666 |
SED65898.1 | recA | SAMN04488554_0367 | SAMN04488554_0907 | ATP-dependent DNA helicase PcrA. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.882 |
SED65898.1 | topA | SAMN04488554_0367 | SAMN04488554_3552 | ATP-dependent DNA helicase PcrA. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.750 |
SED70483.1 | SED65898.1 | SAMN04488554_0480 | SAMN04488554_0367 | DNA helicase-2 / ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily. | ATP-dependent DNA helicase PcrA. | 0.919 |
SED70483.1 | SED93014.1 | SAMN04488554_0480 | SAMN04488554_1089 | DNA helicase-2 / ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily. | 5'-3' exonuclease. | 0.478 |
SED70483.1 | SED94904.1 | SAMN04488554_0480 | SAMN04488554_1137 | DNA helicase-2 / ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily. | Lamin Tail Domain. | 0.457 |
SED70483.1 | SEE68121.1 | SAMN04488554_0480 | SAMN04488554_2443 | DNA helicase-2 / ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily. | ATP-dependent DNA helicase RecQ. | 0.842 |
SED70483.1 | SEE97353.1 | SAMN04488554_0480 | SAMN04488554_4013 | DNA helicase-2 / ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily. | Concanavalin A-like lectin/glucanases superfamily protein. | 0.457 |
SED70483.1 | polA | SAMN04488554_0480 | SAMN04488554_1663 | DNA helicase-2 / ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.608 |
SED70483.1 | recA | SAMN04488554_0480 | SAMN04488554_0907 | DNA helicase-2 / ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.805 |
SED70483.1 | topA | SAMN04488554_0480 | SAMN04488554_3552 | DNA helicase-2 / ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.731 |
SED93014.1 | SED65898.1 | SAMN04488554_1089 | SAMN04488554_0367 | 5'-3' exonuclease. | ATP-dependent DNA helicase PcrA. | 0.545 |
SED93014.1 | SED70483.1 | SAMN04488554_1089 | SAMN04488554_0480 | 5'-3' exonuclease. | DNA helicase-2 / ATP-dependent DNA helicase PcrA; Belongs to the helicase family. UvrD subfamily. | 0.478 |
SED93014.1 | SED94904.1 | SAMN04488554_1089 | SAMN04488554_1137 | 5'-3' exonuclease. | Lamin Tail Domain. | 0.929 |
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