STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE72365.1CAAX protease self-immunity. (266 aa)    
Predicted Functional Partners:
SEE89807.1
Ribosomal protein S12 methylthiotransferase accessory factor.
  
  
 0.572
SEE72386.1
Conserved hypothetical protein.
       0.541
SED60000.1
Acyl dehydratase.
  
     0.506
SEE72344.1
DNA-binding transcriptional regulator, FadR family.
       0.479
SEE01755.1
Hypothetical protein.
  
     0.417
SEE00256.1
PucR C-terminal helix-turn-helix domain-containing protein.
  
     0.408
SEE89791.1
Nitroreductase.
 
    0.403
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.