STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE75550.1Serine phosphatase RsbU, regulator of sigma subunit. (391 aa)    
Predicted Functional Partners:
SEE75664.1
Hypothetical protein.
 
0.965
SEE75597.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 0.954
SEE75618.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
 0.944
SEE92273.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
 
 
  0.890
SEE63634.1
Anti-anti-sigma factor.
  
 0.870
SEE99556.1
Signal transduction histidine kinase.
 
 
  0.836
SEE93345.1
Two-component system, OmpR family, sensor kinase.
 
 
  0.798
SEE75641.1
Response regulator receiver domain-containing protein.
 
 
 
0.793
SEE10134.1
Signal transduction histidine kinase.
 
 
  0.773
SEE75572.1
NTE family protein; Manually curated.
       0.773
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.