STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE83478.1Putative aldouronate transport system substrate-binding protein. (555 aa)    
Predicted Functional Partners:
SEE83499.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 
  0.899
SEE83524.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.886
SEE96433.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.835
SEE96444.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 
  0.800
SEE25498.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
  
  0.783
SEE14888.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.637
SED83489.1
ABC-type sugar transport system, ATPase component; Belongs to the ABC transporter superfamily.
   
  0.608
SEE92699.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
   
  0.608
SEE25541.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.593
SEE26513.1
Methane oxygenase PmoA.
  
     0.561
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.