Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEE85493.1DNA-binding transcriptional regulator LsrR, DeoR family. (314 aa)    
Predicted Functional Partners:
SED83045.1
Dihydroxyacetone kinase DhaK subunit.
   
  0.765
SED75745.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.527
SEE85512.1
Choline-sulfatase.
       0.522
SED75779.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.508
SED75821.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
     0.489
SEE85468.1
2-deoxy-D-gluconate 3-dehydrogenase.
       0.477
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.