STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE85958.1Putative tricarboxylic transport membrane protein. (503 aa)    
Predicted Functional Partners:
SEE85919.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
  
 0.955
SEE64363.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
  
 0.909
SEE85938.1
Tripartite tricarboxylate transporter TctB family protein.
       0.714
SEE20044.1
TRAP transporter, 4TM/12TM fusion protein.
  
     0.655
SEE19803.1
Hypothetical protein.
  
     0.590
SEE85976.1
Protein of unknown function.
       0.548
SEE85880.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
       0.504
SEE85901.1
Choline-sulfatase.
       0.504
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.