STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE86611.1mRNA interferase MazF; Manually curated. (104 aa)    
Predicted Functional Partners:
SEE86626.1
Hypothetical protein.
       0.807
vapC
Predicted nucleic acid-binding protein, contains PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
   
 0.707
SEE70254.1
Antitoxin ParD1/3/4.
   
   0.586
SEE80984.1
Putative addiction module antidote protein, CC2985 family.
   
   0.586
SEE99031.1
Antitoxin ParD1/3/4.
   
   0.586
SEE86665.1
Hypothetical protein.
 
     0.579
SEE20884.1
Predicted helicase.
  
     0.546
SEE86643.1
Uncharacterized conserved protein, contains HEPN domain.
       0.510
SEE63942.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
     0.454
SEE97047.1
Hypothetical protein.
  
     0.442
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.