STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE91714.1PQQ-like domain-containing protein. (811 aa)    
Predicted Functional Partners:
SEE72000.1
Hypothetical protein.
  
     0.758
SEE91696.1
Predicted dehydrogenase.
 
     0.757
SEE86554.1
Dihydrodipicolinate synthetase family protein; Belongs to the DapA family.
  
     0.725
SEE86572.1
Nucleoside-diphosphate-sugar epimerase.
  
     0.725
SED93432.1
Hypothetical protein.
  
     0.719
SEE99087.1
Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
  
     0.719
SED93400.1
Nucleoside-diphosphate-sugar epimerase.
  
     0.711
SEE98967.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
  
     0.677
SEE01210.1
Hyaluronate lyase.
  
     0.673
SEE98988.1
Hypothetical protein.
  
     0.631
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.