STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE91964.1D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). (465 aa)    
Predicted Functional Partners:
SEE92008.1
Putative hydrolase/uncharacterized protein, coenzyme F420 biosynthesis associated.
 
  
 0.835
SEE08896.1
DinB superfamily protein.
   
   0.808
SEE71641.1
CubicO group peptidase, beta-lactamase class C family.
     
 0.769
SEE96223.1
CubicO group peptidase, beta-lactamase class C family.
     
 0.767
SEE15228.1
D-alanyl-D-alanine carboxypeptidase.
     
 0.715
SEE83318.1
CubicO group peptidase, beta-lactamase class C family.
     
 0.715
SEE75841.1
Membrane carboxypeptidase (penicillin-binding protein).
      
 0.602
SEE79825.1
Cell elongation-specific peptidoglycan D,D-transpeptidase.
      
 0.602
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
       0.583
SEE90873.1
Membrane carboxypeptidase (penicillin-binding protein).
      
 0.543
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.