STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE94380.1Signal transduction histidine kinase. (642 aa)    
Predicted Functional Partners:
SEE94396.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.941
SED72584.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.873
SEE96281.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.869
SEE11088.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.868
SEE66598.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.864
SEE72976.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.864
SEE86014.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.863
SEE23994.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.860
SED78762.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.859
SED89779.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.858
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.