STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF00823.1Energy-coupling factor transport system permease protein. (339 aa)    
Predicted Functional Partners:
SEF00845.1
Energy-coupling factor transport system substrate-specific component.
 
 0.999
SEF00836.1
Energy-coupling factor transport system ATP-binding protein.
  0.993
SEE80316.1
Biotin transport system substrate-specific component.
  
 0.990
SEF00813.1
Hypothetical protein.
 
    0.985
SEE93859.1
Energy-coupling factor transport system ATP-binding protein.
  0.821
SED54543.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
   
  0.715
SED75057.1
ABC transporter.
   
  0.715
SEE27940.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
   
  0.715
SEE27984.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
   
  0.715
SEE71618.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.715
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.