STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF00868.1UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (247 aa)    
Predicted Functional Partners:
SEF00880.1
Sensor histidine kinase inhibitor, KipI family.
 
 0.999
SEF00891.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
 
 0.999
SED71858.1
L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.909
SEE72161.1
L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.909
SEE01139.1
L-glutamine synthetase.
   
 
  0.884
SEE01330.1
L-glutamine synthetase.
   
 
  0.884
SED52850.1
Succinate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.526
SED68414.1
Aldehyde dehydrogenase family protein.
   
 
  0.526
SED68455.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.526
SED74510.1
Coniferyl-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.526
Your Current Organism:
Haloactinobacterium album
NCBI taxonomy Id: 648782
Other names: Bogoriellaceae bacterium YIM 93306, CCTCC AB 208069, DSM 21368, H. album, Haloactinobacterium album Tang et al. 2010, KCTC 19413, YIM 93306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.