STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU96744.1TIGRFAM: cytochrome C family protein; KEGG: ddf:DEFDS_0746 multiheme C-type cytochrome. (890 aa)    
Predicted Functional Partners:
ADU96750.1
KEGG: dap:Dacet_0794 hypothetical protein.
 
 
 0.955
ADU96748.1
Hypothetical protein; KEGG: ddf:DEFDS_0742 multiheme C-type cytochrome.
 
  
 0.949
ADU96747.1
KEGG: cla:Cla_0807 cytochrome c family protein.
 
  
 0.942
ADU96745.1
PFAM: NHL repeat containing protein; KEGG: dak:DaAHT2_2116 NHL repeat containing protein.
 
     0.916
ADU96743.1
KEGG: nve:NEMVE_v1g133919 hypothetical protein.
       0.800
ADU96749.1
KEGG: dak:DaAHT2_2113 hypothetical protein.
      
0.772
ADU96751.1
KEGG: gme:Gmet_0911 hypothetical protein.
       0.772
ADU96746.1
KEGG: dap:Dacet_0787 hypothetical protein.
       0.768
ADU95977.1
KEGG: hoh:Hoch_5053 hypothetical protein.
  
     0.761
ADU96516.1
KEGG: ddf:DEFDS_1470 hypothetical protein.
  
     0.752
Your Current Organism:
Thermovibrio ammonificans
NCBI taxonomy Id: 648996
Other names: T. ammonificans HB-1, Thermovibrio ammonificans DSM 15698, Thermovibrio ammonificans HB-1, Thermovibrio ammonificans str. HB-1, Thermovibrio ammonificans strain HB-1
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