Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADU96773.1KEGG: saf:SULAZ_0913 hypothetical protein. (327 aa)    
Predicted Functional Partners:
ADU96772.1
KEGG: saf:SULAZ_0912 hypothetical protein.
 
  
 0.962
ADU96771.1
KEGG: saf:SULAZ_0911 putative lipoprotein.
 
  
 0.961
ADU96774.1
PFAM: glycosyl transferase group 1; KEGG: sul:SYO3AOP1_0533 glycosyl transferase group 1.
 
   0.960
ADU96775.1
KEGG: saf:SULAZ_0915 inner membrane protein.
 
  
 0.958
ADU96776.1
PFAM: TM1410 hypothetical-related protein; KEGG: sul:SYO3AOP1_0535 hypothetical protein.
 
   
 0.955
ADU96648.1
KEGG: tet:TTHERM_00047130 DNA-directed RNA polymerase, omega subunit family protein.
  
 0.952
ADU96778.1
KEGG: saf:SULAZ_0918 tetratricopeptide repeat domain protein.
 
     0.942
ADU96394.1
KEGG: dap:Dacet_0085 hypothetical protein.
    
 0.860
ADU96284.1
Ankyrin; KEGG: pmx:PERMA_0371 MHC_I C-terminus family protein; PFAM: Ankyrin; SMART: Ankyrin.
   
 0.857
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.840
Your Current Organism:
Thermovibrio ammonificans
NCBI taxonomy Id: 648996
Other names: T. ammonificans HB-1, Thermovibrio ammonificans DSM 15698, Thermovibrio ammonificans HB-1, Thermovibrio ammonificans str. HB-1, Thermovibrio ammonificans strain HB-1
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