STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU97315.1KEGG: ade:Adeh_0635 fimbrial protein pilin. (192 aa)    
Predicted Functional Partners:
ADU97109.1
KEGG: ddf:DEFDS_0860 hypothetical protein.
  
  
 0.799
ADU97111.1
KEGG: pmx:PERMA_1154 hypothetical protein.
 
  
 0.790
ADU97312.1
KEGG: gur:Gura_2674 hypothetical protein.
 
     0.719
ADU96870.1
PFAM: type II and III secretion system protein; NolW domain protein; KEGG: hna:Hneap_1941 type IV pilus secretin PilQ.
 
   
 0.696
ADU97311.1
KEGG: gur:Gura_2673 hypothetical protein.
 
     0.663
ADU97313.1
KEGG: glo:Glov_2089 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.605
ADU97314.1
Hypothetical protein; KEGG: tin:Tint_0644 Tfp pilus assembly protein PilE-like protein.
 
    
0.592
ADU96866.1
KEGG: nde:NIDE1348 type IV pilus biogenesis protein PilM; TIGRFAM: type IV pilus assembly protein PilM; PFAM: cell division protein FtsA.
 
   
 0.591
ADU96863.1
KEGG: dma:DMR_28370 general secretion pathway protein D precursor; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein.
 
     0.527
ADU97316.1
PFAM: Oligosaccharyl transferase STT3 subunit; KEGG: ddf:DEFDS_0397 hypothetical protein.
       0.492
Your Current Organism:
Thermovibrio ammonificans
NCBI taxonomy Id: 648996
Other names: T. ammonificans HB-1, Thermovibrio ammonificans DSM 15698, Thermovibrio ammonificans HB-1, Thermovibrio ammonificans str. HB-1, Thermovibrio ammonificans strain HB-1
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