STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000819865_00063Unannotated protein. (163 aa)    
Predicted Functional Partners:
GCA_000819865_01915
Unannotated protein.
    
 
 0.931
GCA_000819865_01150
Unannotated protein.
   
  
 0.907
GCA_000819865_00224
Unannotated protein.
   
    0.863
GCA_000819865_02615
Unannotated protein.
   
  
 0.846
GCA_000819865_03902
Unannotated protein.
    
   0.843
GCA_000819865_02986
Unannotated protein.
   
    0.729
GCA_000819865_00895
Unannotated protein.
  
     0.728
GCA_000819865_00143
Unannotated protein.
   
    0.721
GCA_000819865_01877
Unannotated protein.
  
     0.715
GCA_000819865_00795
Unannotated protein.
  
  
 0.711
Your Current Organism:
Aeromonas eucrenophila
NCBI taxonomy Id: 649
Other names: A. eucrenophila, ATCC 23309, Aeromonas sp. DSM 17534, CCUG 30340, CECT 4224, CIP 76.17, DSM 17534, JCM 8238, LMG 3774, LMG:3774, NCIMB 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.