STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000819865_01175Unannotated protein. (322 aa)    
Predicted Functional Partners:
GCA_000819865_00185
Unannotated protein.
 
 
 0.788
GCA_000819865_02140
Unannotated protein.
    
   0.719
GCA_000819865_00740
Unannotated protein.
 
 
 0.674
GCA_000819865_03717
Unannotated protein.
 
 
 0.644
GCA_000819865_00534
Unannotated protein.
   
 0.557
GCA_000819865_01176
Unannotated protein.
       0.542
GCA_000819865_00252
Unannotated protein.
   
 0.535
GCA_000819865_02744
Unannotated protein.
  
 
 0.513
GCA_000819865_03716
Unannotated protein.
 
 
  0.485
GCA_000819865_03061
Unannotated protein.
   
 
 0.476
Your Current Organism:
Aeromonas eucrenophila
NCBI taxonomy Id: 649
Other names: A. eucrenophila, ATCC 23309, Aeromonas sp. DSM 17534, CCUG 30340, CECT 4224, CIP 76.17, DSM 17534, JCM 8238, LMG 3774, LMG:3774, NCIMB 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.