STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000819865_02398Unannotated protein. (162 aa)    
Predicted Functional Partners:
GCA_000819865_03123
Unannotated protein.
 
 
 0.965
GCA_000819865_03812
Unannotated protein.
  
 
 0.951
GCA_000819865_03633
Unannotated protein.
 
 
 
 0.950
GCA_000819865_00658
Unannotated protein.
 
 
 0.947
GCA_000819865_00169
Unannotated protein.
 
 
 0.941
GCA_000819865_00913
Unannotated protein.
 
 
 0.941
GCA_000819865_00680
Unannotated protein.
  
 
 0.940
GCA_000819865_04053
Unannotated protein.
 
 
 
 0.938
GCA_000819865_04052
Unannotated protein.
 
 
 0.937
GCA_000819865_00666
Unannotated protein.
  
 
 0.936
Your Current Organism:
Aeromonas eucrenophila
NCBI taxonomy Id: 649
Other names: A. eucrenophila, ATCC 23309, Aeromonas sp. DSM 17534, CCUG 30340, CECT 4224, CIP 76.17, DSM 17534, JCM 8238, LMG 3774, LMG:3774, NCIMB 74
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.