STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000819865_03560Unannotated protein. (275 aa)    
Predicted Functional Partners:
GCA_000819865_00696
Unannotated protein.
 
   
 0.789
GCA_000819865_03335
Unannotated protein.
 
   
 0.662
GCA_000819865_02293
Unannotated protein.
 
 
 0.576
GCA_000819865_02973
Unannotated protein.
 
  
 0.536
GCA_000819865_03559
Unannotated protein.
       0.446
GCA_000819865_03558
Unannotated protein.
       0.444
GCA_000819865_03355
Unannotated protein.
  
  
 0.436
GCA_000819865_03556
Unannotated protein.
 
     0.434
GCA_000819865_03557
Unannotated protein.
 
     0.426
GCA_000819865_01970
Unannotated protein.
  
   0.412
Your Current Organism:
Aeromonas eucrenophila
NCBI taxonomy Id: 649
Other names: A. eucrenophila, ATCC 23309, Aeromonas sp. DSM 17534, CCUG 30340, CECT 4224, CIP 76.17, DSM 17534, JCM 8238, LMG 3774, LMG:3774, NCIMB 74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.