STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN40585.1Hypothetical protein. (280 aa)    
Predicted Functional Partners:
SFN40571.1
Hypothetical protein.
       0.797
SFN40593.1
Hypothetical protein.
       0.774
SFN40561.1
Bacteroides conjugation system ATPase, TraG family.
       0.767
SFN40608.1
Protein of unknown function.
       0.632
SFN40619.1
Protein of unknown function.
       0.630
SFN40636.1
Hypothetical protein.
       0.609
SFN40547.1
Hypothetical protein.
       0.468
SFN40645.1
Site-specific DNA-methyltransferase (adenine-specific); Belongs to the N(4)/N(6)-methyltransferase family.
       0.411
Your Current Organism:
Bizionia echini
NCBI taxonomy Id: 649333
Other names: B. echini, Bizionia echini Nedashkovskaya et al. 2010, Bizionia sp. KMM 6177, DSM 23925, KCTC 22015, KMM 6177, LMG 25220, LMG:25220
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.