STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN42068.1Por secretion system C-terminal sorting domain-containing protein. (324 aa)    
Predicted Functional Partners:
SFN86531.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.694
SFN87412.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.656
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.653
SFN48547.1
Por secretion system C-terminal sorting domain-containing protein.
  
  
  0.612
SFN95078.1
Conserved repeat domain-containing protein/Por secretion system C-terminal sorting domain-containing protein.
 
     0.612
SFN82660.1
Hypothetical protein.
  
     0.585
SFN89152.1
Peptidase family C25.
  
     0.580
SFN97063.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.579
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
       0.526
SFN44964.1
Two component regulator propeller.
  
     0.484
Your Current Organism:
Bizionia echini
NCBI taxonomy Id: 649333
Other names: B. echini, Bizionia echini Nedashkovskaya et al. 2010, Bizionia sp. KMM 6177, DSM 23925, KCTC 22015, KMM 6177, LMG 25220, LMG:25220
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