STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN49890.1Hypothetical protein. (201 aa)    
Predicted Functional Partners:
SFN49907.1
Outer membrane lipoprotein-sorting protein.
       0.797
SFN49838.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
       0.791
SFN49818.1
Hypothetical protein.
       0.782
SFN49859.1
Outer membrane protein beta-barrel domain-containing protein.
       0.777
SFN49875.1
Outer membrane protein beta-barrel domain-containing protein.
       0.777
SFN49800.1
Hypothetical protein.
       0.762
SFN49940.1
Beta-ketoacyl synthase, N-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.657
SFN49923.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
       0.641
SFN49960.1
3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.624
SFN49766.1
Hypothetical protein.
       0.608
Your Current Organism:
Bizionia echini
NCBI taxonomy Id: 649333
Other names: B. echini, Bizionia echini Nedashkovskaya et al. 2010, Bizionia sp. KMM 6177, DSM 23925, KCTC 22015, KMM 6177, LMG 25220, LMG:25220
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.