STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN65721.1Hypothetical protein. (229 aa)    
Predicted Functional Partners:
SFN82004.1
Hypothetical protein.
  
     0.753
SFN76299.1
Protein of unknown function.
  
     0.747
SFN76265.1
Hypothetical protein.
  
     0.722
SFN76279.1
Protein of unknown function.
  
     0.717
SFN64802.1
Putative MetA-pathway of phenol degradation.
  
     0.714
SFN80011.1
Hypothetical protein.
  
     0.711
SFN95810.1
Hypothetical protein.
  
     0.703
SFN79062.1
Hypothetical protein.
  
     0.688
SFN48142.1
Hypothetical protein.
  
     0.687
SFN91016.1
Hypothetical protein.
  
     0.685
Your Current Organism:
Bizionia echini
NCBI taxonomy Id: 649333
Other names: B. echini, Bizionia echini Nedashkovskaya et al. 2010, Bizionia sp. KMM 6177, DSM 23925, KCTC 22015, KMM 6177, LMG 25220, LMG:25220
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.